BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019C04SP1|AL427455
(923 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1013 1632 0.0
>3x_Contig1013
Length = 5070
Score = 1632 bits (816), Expect = 0.0
Identities = 890/924 (96%), Gaps = 1/924 (0%)
Strand = Plus / Plus
Query: 1 gacacagaaatccagtagttacgaatatggtaatccttctgctttgccagatctcttata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1934 gacacagaaatccagtagttacgaatatggtaatccttctgctttgccagatctcttata 1993
Query: 61 cggtttagagagtctaccaacggtctcaggtaaagattgttcaacacctccgcagtgccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1994 cggtttagagagtctaccaacggtctcaggtaaagattgttcaacacctccgcagtgccc 2053
Query: 121 ttcggtgcaattgattcaggatagagacgattttggattattgacatctggrggaagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2054 ttcggtgcaattgattcaggatagagacgattttggattattgacatctggaggaagaag 2113
Query: 181 tctaaagaacggatctaagatattcagtgctaccactcaacaatcccccaaaaatgaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2114 tctaaagaacggatctaagatattcagtgctaccactcaacaatcccccaaaaatgaact 2173
Query: 241 ggtagaaccaaatagcggttcccaaawagtggtcattccaacgttcagggaagadaccgg 300
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 2174 ggtagaaccaaatagcggttcccaaaaagtggtcattccaacgttcagggaagaaaccgg 2233
Query: 301 tttggaagttcattctattgcdagtwacttacaagtcggcacattaaccgaatcagattt 360
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 2234 tttggaagttcattctattgcaagtaacttacaagtcggcacattaaccgaatcagattt 2293
Query: 361 gattaatttggccagcgctaagagaagatctttcatggrtgccaagttttacgatgaaga 420
|||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2294 gattaaattggccagcgctaagagaagatctttcatggatgccaagttttacgatgaaga 2353
Query: 421 atctgagatttctgacgatgaacaagaggaacatcaaggttcaatacatgttccttgtca 480
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 2354 atctgagatttctgacgatgaacaagaggaacatcaaggatcaaaacatgttccttgtca 2413
Query: 481 tgaaccatcgttacagaatttgatatcagcagctaattgcgataatgcaactggraagtc 540
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 2414 tgaaccatcgttacagaatttgaaatcagcagctaattgcgataatgcaactggaaagtc 2473
Query: 541 tgataagwatgacactgtcaagttcaacaagtnttcatattttgtcntttatgntgcntc 600
||| ||| |||||||||||||||||||||||| ||||||||| ||| |||||| ||| ||
Sbjct: 2474 tgaaaagaatgacactgtcaagttcaacaagtattcatatttagtcatttatgatgcatc 2533
Query: 601 cacgntatgtcttttttcagaatccactgncaaattgacattgaggattccgaatgakat 660
|||| |||||||| |||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 2534 cacgaaatgtctttattcagaatccactgacaaattgacattgaggattccgaatgagat 2593
Query: 661 ttctgncgctacngataattcatttttttttgctgccgaatctacgccttatcaagaatc 720
| ||| |||||| ||||||||| ||| | |||| ||||||||||||||||||||||||||
Sbjct: 2594 tactgacgctacagataattcaatttatattgcagccgaatctacgccttatcaagaatc 2653
Query: 721 tacaatgctgaaatctatcttgaaacgtaggactaacgagcaagaagacatagaagctga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2654 tacaatgctgaaatctatcttgaaacgtaggactaacgagcaagaagacatagaagctga 2713
Query: 781 acgtgcgargaaatgtgacgaaattgatgctactgattttttacagtttgttg-aaacca 839
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2714 acgtgcgaagaaatgtgacgaaattgatgctactgattttttacagtttgttgaaaacca 2773
Query: 840 tgagagtaagawaaggaggggtgaacagctattagtccttgctcgtgaaagacaattgca 899
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2774 tgagagtaagaaaaggaggggtgaacagctattagtccttgctcgtgaaagacaattgca 2833
Query: 900 aaattactatgacgatcaggckgt 923
||||||||||||||||||||| ||
Sbjct: 2834 aaattactatgacgatcaggctgt 2857
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5987
Number of Sequences: 1807
Number of extensions: 5987
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 923
length of database: 10,358,551
effective HSP length: 16
effective length of query: 907
effective length of database: 10,329,639
effective search space: 9368982573
effective search space used: 9368982573
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)